All of it is allowed. Try to find non criminal drug possession friends to spend the night with, it will alleviate you having to experience the fall out from police serving a search warrant.
What are your rights?.... Each person, whether they are the resident or not, maintains constitutional and procedural rights. Based on your facts here, I do not see that yours were violated. I know it was a bit uncomfortable to be nude but they did allow you to put on a t-shirt. As far as the busted door frame your were not the owner and do not have standing.
The information provided is not advice but a legal perspective and you should schedule a consultation with the lawyer of your choice.
Officers acting with a "no knock" search warrant are allowed to bust down the door without regard to time of day.
Persons in a house being searched need to obey the officers' commands. Why? If the commands are lawful, then because the commands are lawful. If the commands are for some reason NOT lawful, then because the officer is not going to argue the matter during the search, but will likely simply arrest the non-compliant subject.
Were your rights violated? I have no way to know without examining the search warrant, reading the offense report, and genearlly investigating the case.
Answers on Avvo are for general information purposes only and should not be relied upon as legal advice. No attorney / client relationship is created by providing this answer. For specific advice about your situation, you should consult a competent attorney of your choosing.