The basis of the house is stepped up to the date of death value for purposes of calculating gain or loss. You should have received a copy of the inheritance tax return that included the house at its fair market value (FMV) at date of death. You take that FMV and any other improvement made to the house after the date of death and divide it by 3. That is your basis for calculating gain or loss on the sale for each of you. Then report this gain on your Schedule D of your Form 1040.
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If you received the Form 1099-S personally, with your siblings, then the house must have been distributed from the estate. Otherwise the estate would have received it and reported the sale on its Form 1041 return.
As my colleague correctly points out, the basis in the house was adjusted (up or down) to the fair market value on your dad's date of death. If the estate did not have to file an estate tax return it might not have performed a certified appraisal. However, an executor is remiss for not at least obtaining a CMA (comparative market analysis) from a competent local realtor. If that was not done you and your siblings should obtain one from a local realtor as of the date of death. You split the new basis and the proceeds/gain (if any) on an equal basis.
I assume none of you lived in it and it was not rented out following your father's death (so no depreciation recapture).
You should get a copy of the report from the executor for your files. Mr. Fromm's advice about the taxable proceeds is correct. Make sure that you distinguish between renovation expenses (things that increased the value of the house and may be added to basis) and mere repairs, which do not increase the basis.