I understand that you are in a tough spot. However, more information is needed in order to properly respond.
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If your employer is large enough to fall under the FMLA, then it is likely that it could continue to provide you leave as a reasonable accommodation. Under the ADA and the NJ Law Against Discrimination, employer's have an obligation to provide reasonable accommodations to employees with disabilities. The definition of disability in New Jersey is pretty broad and it's likely that you're protected. You should contact your employer to ask them to provide you additional leave time as a reasonable accommodation. Also, you should speak with a qualified employment attorney.
Since you cannot work due to your own medical condition, you should stay on temporary disability.
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